Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.85■□□□□ 0.29
SCAMP4Q969E2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 BX842568.4-201ENST00000421222 227 ntBASIC16.84■□□□□ 0.29
SCAMP4Q969E2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 AC092865.5-201ENST00000545435 363 ntBASIC16.84■□□□□ 0.29
SCAMP4Q969E2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 AC002347.1-201ENST00000569543 541 ntBASIC16.84■□□□□ 0.29
SCAMP4Q969E2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 AC023141.13-201ENST00000604991 943 ntBASIC16.84■□□□□ 0.29
SCAMP4Q969E2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 AL021920.2-201ENST00000624828 1351 ntBASIC16.84■□□□□ 0.29
SCAMP4Q969E2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SCAMP4Q969E2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SCAMP4Q969E2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 AC004832.2-201ENST00000426397 482 ntBASIC16.83■□□□□ 0.28
SCAMP4Q969E2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 PCDHB17P-201ENST00000539533 2393 ntBASIC16.83■□□□□ 0.28
SCAMP4Q969E2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 KRT8P49-201ENST00000604166 1432 ntBASIC16.83■□□□□ 0.28
SCAMP4Q969E2 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 AC007064.4-201ENST00000637740 555 ntBASIC16.83■□□□□ 0.28
SCAMP4Q969E2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.83■□□□□ 0.28
SCAMP4Q969E2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 SLC22A20-204ENST00000530038 1673 ntBASIC16.82■□□□□ 0.28
SCAMP4Q969E2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SCAMP4Q969E2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms