Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 Z83851.2-201ENST00000609564 659 ntBASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 AC116407.3-201ENST00000623905 1129 ntBASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 SLC22A20-204ENST00000530038 1673 ntBASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 HCG4B-203ENST00000450128 991 ntBASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 AC093909.1-201ENST00000504731 1122 ntBASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 UNC93B6-202ENST00000528242 690 ntBASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHROOM3Q8TF72 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHROOM3Q8TF72 PI4KAP1-204ENST00000612579 1703 ntBASIC17.27■□□□□ 0.35
SHROOM3Q8TF72 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHROOM3Q8TF72 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHROOM3Q8TF72 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.27■□□□□ 0.35
SHROOM3Q8TF72 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHROOM3Q8TF72 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHROOM3Q8TF72 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHROOM3Q8TF72 KRT8P49-201ENST00000604166 1432 ntBASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 METTL21AP1-201ENST00000438852 635 ntBASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHROOM3Q8TF72 LINC00895-201ENST00000629028 1637 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms