Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 FOXO1B-201ENST00000504678 1527 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 MIR1233-2-201ENST00000408138 82 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 MIR1233-1-201ENST00000408722 82 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SPDYE11-202ENST00000450699 704 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SPDYE9P-201ENST00000570642 692 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SPDYE10P-202ENST00000612005 668 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SPDYE8P-202ENST00000612377 668 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 AGGF1P2-201ENST00000426656 2106 ntBASIC17.05■□□□□ 0.32
CHD5Q8TDI0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHD5Q8TDI0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AC254562.1-201ENST00000417586 456 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 FAM58CP-201ENST00000435741 640 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AC112191.1-201ENST00000523689 701 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AC211486.1-202ENST00000416371 468 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 HTR5BP-201ENST00000430851 1154 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AC211476.1-201ENST00000503899 468 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 AP002472.1-201ENST00000577490 586 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 GPALPP1-207ENST00000611650 899 ntBASIC17.04■□□□□ 0.32
CHD5Q8TDI0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CHD5Q8TDI0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.03■□□□□ 0.32
CHD5Q8TDI0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms