Protein–RNA interactions for Protein: Q8NCT1

ARRDC4, Arrestin domain-containing protein 4, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC4Q8NCT1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ARRDC4Q8NCT1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 ATP5G2P4-201ENST00000442175 420 ntBASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 RARRES2P9-201ENST00000565168 469 ntBASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ARRDC4Q8NCT1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 AL138918.1-201ENST00000568306 659 ntBASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 AC007967.4-201ENST00000614700 386 ntBASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 AL138828.2-201ENST00000615812 383 ntBASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 TOP3BP1-201ENST00000420768 1380 ntBASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ARRDC4Q8NCT1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 HLA-V-204ENST00000476601 1289 ntBASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 AC105233.2-201ENST00000523697 349 ntBASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 AF228730.5-201ENST00000530288 346 ntBASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 LYSMD4-203ENST00000378904 2122 ntBASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ARRDC4Q8NCT1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARRDC4Q8NCT1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARRDC4Q8NCT1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ARRDC4Q8NCT1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.77■□□□□ 0.59
ARRDC4Q8NCT1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.77■□□□□ 0.59
ARRDC4Q8NCT1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ARRDC4Q8NCT1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.77■□□□□ 0.59
ARRDC4Q8NCT1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARRDC4Q8NCT1 AP3S2-216ENST00000617003 1561 ntBASIC18.76■□□□□ 0.59
ARRDC4Q8NCT1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ARRDC4Q8NCT1 AL390961.4-201ENST00000623958 2535 ntBASIC18.76■□□□□ 0.59
ARRDC4Q8NCT1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
ARRDC4Q8NCT1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ARRDC4Q8NCT1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms