Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLGALT1Q8NBJ5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
COLGALT1Q8NBJ5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLGALT1Q8NBJ5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLGALT1Q8NBJ5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COLGALT1Q8NBJ5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COLGALT1Q8NBJ5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 FAM58DP-201ENST00000428076 619 ntBASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 AC069335.1-201ENST00000489972 472 ntBASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 RARRES2P8-201ENST00000566335 367 ntBASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 MIR4745-201ENST00000577608 62 ntBASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.27■□□□□ 0.52
COLGALT1Q8NBJ5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COLGALT1Q8NBJ5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COLGALT1Q8NBJ5 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COLGALT1Q8NBJ5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COLGALT1Q8NBJ5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.27■□□□□ 0.51
COLGALT1Q8NBJ5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COLGALT1Q8NBJ5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COLGALT1Q8NBJ5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 LTB4R2-202ENST00000528054 3092 ntBASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 CNN2P2-201ENST00000443536 909 ntBASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 CNN2P3-201ENST00000450201 906 ntBASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 AC093214.1-201ENST00000511688 1107 ntBASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 AL136317.3-201ENST00000618497 906 ntBASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
COLGALT1Q8NBJ5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 AKAP8P1-201ENST00000434743 1349 ntBASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 OR6D1P-202ENST00000641007 5290 ntBASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 DUX4L17-201ENST00000557360 1267 ntBASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.25■□□□□ 0.51
COLGALT1Q8NBJ5 AC138761.1-201ENST00000584393 385 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms