Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 HCG4B-203ENST00000450128 991 ntBASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 AC116353.5-201ENST00000638148 1699 ntBASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 AC093525.9-201ENST00000624961 1746 ntBASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH20Q8N6Y1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 PGAM5P1-201ENST00000518923 814 ntBASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDH20Q8N6Y1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 SLC25A1P3-201ENST00000395415 828 ntBASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 OR7E47P-204ENST00000575924 449 ntBASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDH20Q8N6Y1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms