Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 AC125807.1-201ENST00000483097 614 ntBASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 AL009183.1-201ENST00000603760 355 ntBASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SYNPOQ8N3V7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 AC012569.1-201ENST00000591191 1524 ntBASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 AC002472.2-201ENST00000442739 958 ntBASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.23■□□□□ 0.35
SYNPOQ8N3V7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 AC236430.1-201ENST00000402231 743 ntBASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 AC026150.2-201ENST00000564693 1156 ntBASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 RN7SL204P-201ENST00000582831 262 ntBASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 AL158211.3-201ENST00000607385 239 ntBASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SYNPOQ8N3V7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SYNPOQ8N3V7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms