Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.46□□□□□ -0.58
LINC01561Q8N1V8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 AC073508.3-201ENST00000619697 1419 ntBASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 TERF1P1-201ENST00000311003 1181 ntBASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 TSPY22P-201ENST00000427496 604 ntBASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 SIGLEC30P-201ENST00000455569 941 ntBASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 AC092647.4-201ENST00000457211 535 ntBASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 AC013467.2-201ENST00000605472 835 ntBASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 IGHV3-41-201ENST00000613121 348 ntBASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC01561Q8N1V8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC132938.5-201ENST00000624980 1813 ntBASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC073592.5-201ENST00000624854 528 ntBASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC097493.4-201ENST00000641197 219 ntBASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms