Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 AL138688.1-201ENST00000624851 1594 ntBASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS4Q8IUM7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NPAS4Q8IUM7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 AP3S2-216ENST00000617003 1561 ntBASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 AC027369.6-201ENST00000525520 931 ntBASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 LINC00896-202ENST00000609602 2128 ntBASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 AC100757.3-201ENST00000622361 1406 ntBASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS4Q8IUM7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 CRB3P1-201ENST00000449338 276 ntBASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 AC003101.2-201ENST00000612557 442 ntBASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 AC007967.4-201ENST00000614700 386 ntBASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS4Q8IUM7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.04■□□□□ 0.48
NPAS4Q8IUM7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS4Q8IUM7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms