Protein–RNA interactions for Protein: Q86WS4

C12orf40, Uncharacterized protein C12orf40, humanhuman

Predictions only

Length 652 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40Q86WS4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 RBPMS2P1-201ENST00000437762 623 ntBASIC17.21■□□□□ 0.35
C12orf40Q86WS4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 MPDU1-223ENST00000582151 728 ntBASIC17.21■□□□□ 0.35
C12orf40Q86WS4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 AC131009.4-201ENST00000624048 1740 ntBASIC17.21■□□□□ 0.35
C12orf40Q86WS4 CROCCP2-202ENST00000412962 2773 ntBASIC17.21■□□□□ 0.35
C12orf40Q86WS4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
C12orf40Q86WS4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C12orf40Q86WS4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 AC087641.1-201ENST00000557561 1021 ntBASIC17.2■□□□□ 0.34
C12orf40Q86WS4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 AL096865.1-201ENST00000606796 927 ntBASIC17.2■□□□□ 0.34
C12orf40Q86WS4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 UXT-AS1-201ENST00000590504 1525 ntBASIC17.2■□□□□ 0.34
C12orf40Q86WS4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 WASH6P-202ENST00000359512 1437 ntBASIC17.2■□□□□ 0.34
C12orf40Q86WS4 LINC00896-202ENST00000609602 2128 ntBASIC17.2■□□□□ 0.34
C12orf40Q86WS4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C12orf40Q86WS4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 IGHV3-62-201ENST00000520057 340 ntBASIC17.19■□□□□ 0.34
C12orf40Q86WS4 AP001059.3-201ENST00000619053 235 ntBASIC17.19■□□□□ 0.34
C12orf40Q86WS4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 AC068880.1-201ENST00000507289 2297 ntBASIC17.19■□□□□ 0.34
C12orf40Q86WS4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.19■□□□□ 0.34
C12orf40Q86WS4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C12orf40Q86WS4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.18■□□□□ 0.34
C12orf40Q86WS4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
C12orf40Q86WS4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms