Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 AL662844.4-201ENST00000606367 2838 ntBASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD1LQ86WJ1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 PTCHD3P3-201ENST00000403073 906 ntBASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 SCARNA2-201ENST00000458748 420 ntBASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 CLEC4GP1-201ENST00000596555 870 ntBASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 AC013467.2-201ENST00000605472 835 ntBASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHD1LQ86WJ1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 ALOX12P2-203ENST00000570921 1945 ntBASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 AC006538.1-201ENST00000567905 1585 ntBASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 AC006504.4-201ENST00000592118 1568 ntBASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 TOP3BP1-201ENST00000420768 1380 ntBASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHD1LQ86WJ1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
CHD1LQ86WJ1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 PCDH8P1-201ENST00000428983 2773 ntBASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 DOC2GP-204ENST00000639052 2548 ntBASIC20.95■□□□□ 0.94
CHD1LQ86WJ1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHD1LQ86WJ1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms