Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SLC25A1P4-201ENST00000567977 778 ntBASIC14.18□□□□□ -0.14
ZNF546Q86UE3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 AC073648.6-201ENST00000641589 218 ntBASIC14.18□□□□□ -0.14
ZNF546Q86UE3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF546Q86UE3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 AL009178.2-201ENST00000597278 2719 ntBASIC14.17□□□□□ -0.14
ZNF546Q86UE3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 MESTP1-201ENST00000404287 994 ntBASIC14.17□□□□□ -0.14
ZNF546Q86UE3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 AC006058.3-201ENST00000606217 1069 ntBASIC14.17□□□□□ -0.14
ZNF546Q86UE3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZNF546Q86UE3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms