Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 TSPY16P-201ENST00000449843 468 ntBASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 KRT8P23-201ENST00000560090 1207 ntBASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 AP001350.2-201ENST00000625104 1094 ntBASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC149Q6ZUS6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 IGHV3-42-201ENST00000520410 361 ntBASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 AC140878.1-201ENST00000565277 250 ntBASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 RN7SL204P-201ENST00000582831 262 ntBASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC149Q6ZUS6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 GPS2P2-201ENST00000430745 888 ntBASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 SPCS2P4-201ENST00000436160 681 ntBASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 AC005225.4-201ENST00000557330 545 ntBASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC149Q6ZUS6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms