Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 AP000867.3-201ENST00000524675 377 ntBASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 AC111152.3-201ENST00000569699 673 ntBASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 IGHV3-41-201ENST00000613121 348 ntBASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.63■□□□□ 0.73
PDZRN4Q6ZMN7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 AC026396.1-201ENST00000419388 421 ntBASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 AC012615.1-201ENST00000565797 1299 ntBASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.62■□□□□ 0.73
PDZRN4Q6ZMN7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 DBET-201ENST00000630918 3363 ntBASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDZRN4Q6ZMN7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PDZRN4Q6ZMN7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms