Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NHLRC1Q6VVB1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 EMBP1-201ENST00000458200 901 ntBASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 PCDHA14-201ENST00000506751 2298 ntBASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 AL691432.3-201ENST00000621860 400 ntBASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 LINC02199-201ENST00000506655 2702 ntBASIC15.3■□□□□ 0.04
NHLRC1Q6VVB1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 AC092068.3-201ENST00000587894 2016 ntBASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 NCF1C-201ENST00000438382 1427 ntBASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 AC004706.3-202ENST00000621574 984 ntBASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 AC106886.4-201ENST00000623557 2502 ntBASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
NHLRC1Q6VVB1 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.28■□□□□ 0.04
NHLRC1Q6VVB1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NHLRC1Q6VVB1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NHLRC1Q6VVB1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms