Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 IER3-202ENST00000376377 1350 ntBASIC14.91□□□□□ -0.02
C11orf88Q6PI97 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 LINC01451-201ENST00000623792 534 ntBASIC14.91□□□□□ -0.02
C11orf88Q6PI97 AL023973.1-201ENST00000624619 620 ntBASIC14.91□□□□□ -0.02
C11orf88Q6PI97 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.91□□□□□ -0.02
C11orf88Q6PI97 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 PCED1CP-201ENST00000419887 785 ntBASIC14.9□□□□□ -0.02
C11orf88Q6PI97 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 AC009947.2-201ENST00000444014 672 ntBASIC14.9□□□□□ -0.02
C11orf88Q6PI97 AL136038.3-201ENST00000561909 1096 ntBASIC14.9□□□□□ -0.02
C11orf88Q6PI97 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 AL441883.1-201ENST00000566170 1045 ntBASIC14.9□□□□□ -0.02
C11orf88Q6PI97 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
C11orf88Q6PI97 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 OR2I1P-210ENST00000642037 4691 ntBASIC14.89□□□□□ -0.03
C11orf88Q6PI97 AC005915.1-201ENST00000624912 2018 ntBASIC14.89□□□□□ -0.03
C11orf88Q6PI97 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 AL359075.1-203ENST00000462729 1002 ntBASIC14.89□□□□□ -0.03
C11orf88Q6PI97 FAM86EP-206ENST00000510506 987 ntBASIC14.89□□□□□ -0.03
C11orf88Q6PI97 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
C11orf88Q6PI97 AC036111.1-201ENST00000533973 1582 ntBASIC14.89□□□□□ -0.03
C11orf88Q6PI97 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms