Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PMPCAP1-201ENST00000508114 1576 ntBASIC15.51■□□□□ 0.07
NIPAL3Q6P499 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 DUSP5P1-201ENST00000441325 1139 ntBASIC15.51■□□□□ 0.07
NIPAL3Q6P499 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 AP001269.4-201ENST00000609611 512 ntBASIC15.51■□□□□ 0.07
NIPAL3Q6P499 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
NIPAL3Q6P499 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 AP005117.1-201ENST00000584346 1413 ntBASIC15.5■□□□□ 0.07
NIPAL3Q6P499 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NIPAL3Q6P499 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 AC009336.1-201ENST00000608941 1553 ntBASIC15.49■□□□□ 0.07
NIPAL3Q6P499 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.49■□□□□ 0.07
NIPAL3Q6P499 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NIPAL3Q6P499 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms