Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.28□□□□□ -0.28
ERVFC1-1P60608 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ERVFC1-1P60608 AC092364.2-201ENST00000596710 2692 ntBASIC13.27□□□□□ -0.28
ERVFC1-1P60608 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ERVFC1-1P60608 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ERVFC1-1P60608 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ERVFC1-1P60608 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.27□□□□□ -0.28
ERVFC1-1P60608 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ERVFC1-1P60608 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ERVFC1-1P60608 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 RPS2P55-201ENST00000397318 883 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AP002982.1-201ENST00000492365 877 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AC107956.1-201ENST00000494359 873 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AC233702.5-201ENST00000584107 538 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 MIR4785-201ENST00000585005 73 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 Z99916.2-201ENST00000604037 246 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AC073912.3-201ENST00000624414 853 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 LINC01311-201ENST00000565162 1445 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 AC092053.1-201ENST00000605787 1936 ntBASIC13.27□□□□□ -0.29
ERVFC1-1P60608 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ERVFC1-1P60608 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 CICP14-201ENST00000629111 2732 ntBASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 OR2I1P-209ENST00000641730 5365 ntBASIC13.26□□□□□ -0.29
ERVFC1-1P60608 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 KSR1P1-201ENST00000446298 240 ntBASIC13.26□□□□□ -0.29
ERVFC1-1P60608 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC008040.2-201ENST00000461049 708 ntBASIC13.26□□□□□ -0.29
ERVFC1-1P60608 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.26□□□□□ -0.29
ERVFC1-1P60608 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms