Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
AP3S2P59780 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.65□□□□□ -0.06
AP3S2P59780 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.65□□□□□ -0.06
AP3S2P59780 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.65□□□□□ -0.06
AP3S2P59780 BX088651.1-201ENST00000540551 451 ntBASIC14.65□□□□□ -0.06
AP3S2P59780 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.65□□□□□ -0.06
AP3S2P59780 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.65□□□□□ -0.06
AP3S2P59780 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.65□□□□□ -0.06
AP3S2P59780 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
AP3S2P59780 IKBKGP1-201ENST00000612193 1073 ntBASIC14.65□□□□□ -0.06
AP3S2P59780 AL023803.3-201ENST00000615559 522 ntBASIC14.65□□□□□ -0.06
AP3S2P59780 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
AP3S2P59780 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
AP3S2P59780 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.65□□□□□ -0.06
AP3S2P59780 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
AP3S2P59780 ME2P1-201ENST00000426028 1970 ntBASIC14.65□□□□□ -0.06
AP3S2P59780 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.65□□□□□ -0.06
AP3S2P59780 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.65□□□□□ -0.06
AP3S2P59780 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
AP3S2P59780 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
AP3S2P59780 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 KRT89P-201ENST00000620027 1478 ntBASIC14.64□□□□□ -0.07
AP3S2P59780 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.64□□□□□ -0.07
AP3S2P59780 PCDHA3-202ENST00000532566 4594 ntBASIC14.64□□□□□ -0.07
AP3S2P59780 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
AP3S2P59780 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 IGHV3-52-201ENST00000519770 353 ntBASIC14.64□□□□□ -0.07
AP3S2P59780 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 MIR3917-201ENST00000580971 93 ntBASIC14.64□□□□□ -0.07
AP3S2P59780 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
AP3S2P59780 OR2I1P-210ENST00000642037 4691 ntBASIC14.64□□□□□ -0.07
AP3S2P59780 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 DBET-201ENST00000630918 3363 ntBASIC14.64□□□□□ -0.07
AP3S2P59780 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 ALOX12P2-203ENST00000570921 1945 ntBASIC14.64□□□□□ -0.07
AP3S2P59780 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
AP3S2P59780 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S2P59780 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S2P59780 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP3S2P59780 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms