Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATN1P54259 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATN1P54259 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATN1P54259 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATN1P54259 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.62■□□□□ 0.57
ATN1P54259 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ATN1P54259 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 HSFY1P1-201ENST00000423928 1178 ntBASIC18.62■□□□□ 0.57
ATN1P54259 AC142381.1-201ENST00000426099 345 ntBASIC18.62■□□□□ 0.57
ATN1P54259 AC245100.3-201ENST00000441281 285 ntBASIC18.62■□□□□ 0.57
ATN1P54259 AC009477.1-201ENST00000452936 217 ntBASIC18.62■□□□□ 0.57
ATN1P54259 HLA-V-204ENST00000476601 1289 ntBASIC18.62■□□□□ 0.57
ATN1P54259 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.62■□□□□ 0.57
ATN1P54259 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ATN1P54259 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC18.62■□□□□ 0.57
ATN1P54259 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.62■□□□□ 0.57
ATN1P54259 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.62■□□□□ 0.57
ATN1P54259 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ATN1P54259 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ATN1P54259 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.62■□□□□ 0.57
ATN1P54259 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATN1P54259 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ATN1P54259 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ATN1P54259 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ATN1P54259 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.61■□□□□ 0.57
ATN1P54259 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ATN1P54259 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 DGCR5-201ENST00000399539 862 ntBASIC18.61■□□□□ 0.57
ATN1P54259 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ATN1P54259 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ATN1P54259 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.61■□□□□ 0.57
ATN1P54259 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.61■□□□□ 0.57
ATN1P54259 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.61■□□□□ 0.57
ATN1P54259 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.61■□□□□ 0.57
ATN1P54259 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATN1P54259 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.6■□□□□ 0.57
ATN1P54259 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 AC098614.1-201ENST00000368528 745 ntBASIC18.6■□□□□ 0.57
ATN1P54259 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 MIR1909-201ENST00000411312 80 ntBASIC18.6■□□□□ 0.57
ATN1P54259 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 AL353779.1-201ENST00000434793 351 ntBASIC18.6■□□□□ 0.57
ATN1P54259 RPS2P32-201ENST00000439199 892 ntBASIC18.6■□□□□ 0.57
ATN1P54259 GNAQP1-201ENST00000444815 1067 ntBASIC18.6■□□□□ 0.57
ATN1P54259 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.6■□□□□ 0.57
ATN1P54259 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.6■□□□□ 0.57
ATN1P54259 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
ATN1P54259 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.6■□□□□ 0.57
ATN1P54259 AC107308.1-201ENST00000615897 301 ntBASIC18.6■□□□□ 0.57
ATN1P54259 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATN1P54259 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.6■□□□□ 0.57
ATN1P54259 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms