Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC9A3P48764 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.66■□□□□ 0.1
SLC9A3P48764 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC9A3P48764 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC9A3P48764 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC9A3P48764 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SLC9A3P48764 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SLC9A3P48764 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.65■□□□□ 0.1
SLC9A3P48764 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
SLC9A3P48764 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.65■□□□□ 0.1
SLC9A3P48764 AD001527.2-201ENST00000622994 785 ntBASIC15.65■□□□□ 0.1
SLC9A3P48764 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 PCDHB17P-201ENST00000539533 2393 ntBASIC15.65■□□□□ 0.1
SLC9A3P48764 HYMAI-201ENST00000635591 3347 ntBASIC15.65■□□□□ 0.1
SLC9A3P48764 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SLC9A3P48764 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC9A3P48764 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC9A3P48764 TSPY26P-202ENST00000565928 3884 ntBASIC15.65■□□□□ 0.1
SLC9A3P48764 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC9A3P48764 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
SLC9A3P48764 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC9A3P48764 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.64■□□□□ 0.09
SLC9A3P48764 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
SLC9A3P48764 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC9A3P48764 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC9A3P48764 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC9A3P48764 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC9A3P48764 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC9A3P48764 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC9A3P48764 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC9A3P48764 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC9A3P48764 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC9A3P48764 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC9A3P48764 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SLC9A3P48764 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC9A3P48764 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 AC005332.1-201ENST00000577698 1310 ntBASIC15.64■□□□□ 0.09
SLC9A3P48764 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC9A3P48764 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms