Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CHRNA4P43681 AL031284.1-201ENST00000419297 478 ntBASIC17.15■□□□□ 0.34
CHRNA4P43681 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CHRNA4P43681 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRNA4P43681 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRNA4P43681 AL356488.2-201ENST00000602755 427 ntBASIC17.15■□□□□ 0.34
CHRNA4P43681 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.15■□□□□ 0.34
CHRNA4P43681 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHRNA4P43681 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.15■□□□□ 0.34
CHRNA4P43681 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CHRNA4P43681 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRNA4P43681 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CHRNA4P43681 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CHRNA4P43681 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.15■□□□□ 0.34
CHRNA4P43681 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.15■□□□□ 0.34
CHRNA4P43681 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHRNA4P43681 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNA4P43681 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHRNA4P43681 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CHRNA4P43681 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 TPM4P1-201ENST00000436100 807 ntBASIC17.14■□□□□ 0.33
CHRNA4P43681 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNA4P43681 SLC25A6P2-201ENST00000497974 877 ntBASIC17.14■□□□□ 0.33
CHRNA4P43681 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.14■□□□□ 0.33
CHRNA4P43681 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHRNA4P43681 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHRNA4P43681 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CHRNA4P43681 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 UBALD1-205ENST00000590891 2641 ntBASIC17.14■□□□□ 0.33
CHRNA4P43681 AC002310.6-201ENST00000624451 1377 ntBASIC17.14■□□□□ 0.33
CHRNA4P43681 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.14■□□□□ 0.33
CHRNA4P43681 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA4P43681 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHRNA4P43681 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA4P43681 PCDHA14-201ENST00000506751 2298 ntBASIC17.13■□□□□ 0.33
CHRNA4P43681 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNA4P43681 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CHRNA4P43681 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA4P43681 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.13■□□□□ 0.33
CHRNA4P43681 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHRNA4P43681 AC092910.1-201ENST00000482027 1129 ntBASIC17.13■□□□□ 0.33
CHRNA4P43681 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.13■□□□□ 0.33
CHRNA4P43681 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
CHRNA4P43681 MIR1199-201ENST00000621445 119 ntBASIC17.13■□□□□ 0.33
CHRNA4P43681 AC117500.6-201ENST00000624871 588 ntBASIC17.13■□□□□ 0.33
CHRNA4P43681 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CHRNA4P43681 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CHRNA4P43681 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHRNA4P43681 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 TUBB8P12-201ENST00000308911 1335 ntBASIC17.13■□□□□ 0.33
CHRNA4P43681 TUBB7P-202ENST00000428444 1305 ntBASIC17.13■□□□□ 0.33
CHRNA4P43681 TUBB8P7-204ENST00000567960 1332 ntBASIC17.13■□□□□ 0.33
CHRNA4P43681 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHRNA4P43681 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CHRNA4P43681 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA4P43681 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA4P43681 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA4P43681 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms