Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.36■■□□□ 1.01
COL15A1P39059 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.35■■□□□ 1.01
COL15A1P39059 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COL15A1P39059 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 AC100757.3-201ENST00000622361 1406 ntBASIC21.35■■□□□ 1.01
COL15A1P39059 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COL15A1P39059 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL15A1P39059 TSSK5P-201ENST00000423978 907 ntBASIC21.35■■□□□ 1.01
COL15A1P39059 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.35■■□□□ 1.01
COL15A1P39059 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.35■■□□□ 1.01
COL15A1P39059 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.35■■□□□ 1.01
COL15A1P39059 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.35■■□□□ 1.01
COL15A1P39059 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL15A1P39059 AL138918.1-201ENST00000568306 659 ntBASIC21.35■■□□□ 1.01
COL15A1P39059 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.35■■□□□ 1.01
COL15A1P39059 SPDYE12P-201ENST00000618416 771 ntBASIC21.35■■□□□ 1.01
COL15A1P39059 AC073592.8-201ENST00000624126 511 ntBASIC21.35■■□□□ 1.01
COL15A1P39059 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.35■■□□□ 1.01
COL15A1P39059 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.34■■□□□ 1.01
COL15A1P39059 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 AC131009.4-201ENST00000624048 1740 ntBASIC21.34■■□□□ 1.01
COL15A1P39059 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 PCDHB18P-201ENST00000524813 2368 ntBASIC21.34■■□□□ 1.01
COL15A1P39059 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL15A1P39059 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.34■■□□□ 1.01
COL15A1P39059 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.34■■□□□ 1.01
COL15A1P39059 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.34■■□□□ 1.01
COL15A1P39059 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.34■■□□□ 1.01
COL15A1P39059 AC124947.2-201ENST00000547118 1133 ntBASIC21.34■■□□□ 1.01
COL15A1P39059 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 CROCCP2-202ENST00000412962 2773 ntBASIC21.33■■□□□ 1.01
COL15A1P39059 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.33■■□□□ 1.01
COL15A1P39059 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL15A1P39059 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.33■■□□□ 1
COL15A1P39059 HLA-J-202ENST00000469281 1241 ntBASIC21.33■■□□□ 1
COL15A1P39059 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COL15A1P39059 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COL15A1P39059 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
COL15A1P39059 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.32■■□□□ 1
COL15A1P39059 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.32■■□□□ 1
COL15A1P39059 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL15A1P39059 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL15A1P39059 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL15A1P39059 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.32■■□□□ 1
COL15A1P39059 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC21.32■■□□□ 1
COL15A1P39059 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
COL15A1P39059 FRMD8P1-201ENST00000440433 1524 ntBASIC21.32■■□□□ 1
COL15A1P39059 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COL15A1P39059 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL15A1P39059 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.32■■□□□ 1
COL15A1P39059 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.32■■□□□ 1
COL15A1P39059 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.32■■□□□ 1
COL15A1P39059 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.32■■□□□ 1
COL15A1P39059 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.32■■□□□ 1
COL15A1P39059 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COL15A1P39059 MPDU1-223ENST00000582151 728 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms