Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA3P29320 AL592071.1-201ENST00000611956 408 ntBASIC16.59■□□□□ 0.25
EPHA3P29320 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHA3P29320 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHA3P29320 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA3P29320 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA3P29320 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.59■□□□□ 0.25
EPHA3P29320 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
EPHA3P29320 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
EPHA3P29320 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.59■□□□□ 0.25
EPHA3P29320 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 AC132938.5-201ENST00000624980 1813 ntBASIC16.59■□□□□ 0.25
EPHA3P29320 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
EPHA3P29320 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
EPHA3P29320 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.58■□□□□ 0.25
EPHA3P29320 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA3P29320 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA3P29320 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA3P29320 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA3P29320 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
EPHA3P29320 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.58■□□□□ 0.25
EPHA3P29320 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
EPHA3P29320 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
EPHA3P29320 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 AP002490.2-201ENST00000524791 560 ntBASIC16.58■□□□□ 0.24
EPHA3P29320 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.58■□□□□ 0.24
EPHA3P29320 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.58■□□□□ 0.24
EPHA3P29320 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
EPHA3P29320 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
EPHA3P29320 AC073912.3-201ENST00000624414 853 ntBASIC16.58■□□□□ 0.24
EPHA3P29320 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.58■□□□□ 0.24
EPHA3P29320 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.58■□□□□ 0.24
EPHA3P29320 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.58■□□□□ 0.24
EPHA3P29320 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.58■□□□□ 0.24
EPHA3P29320 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.58■□□□□ 0.24
EPHA3P29320 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.58■□□□□ 0.24
EPHA3P29320 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.58■□□□□ 0.24
EPHA3P29320 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
EPHA3P29320 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
EPHA3P29320 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
EPHA3P29320 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
EPHA3P29320 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 TUBB8P12-201ENST00000308911 1335 ntBASIC16.57■□□□□ 0.24
EPHA3P29320 TUBB7P-202ENST00000428444 1305 ntBASIC16.57■□□□□ 0.24
EPHA3P29320 TUBB8P7-204ENST00000567960 1332 ntBASIC16.57■□□□□ 0.24
EPHA3P29320 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
EPHA3P29320 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.57■□□□□ 0.24
EPHA3P29320 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.57■□□□□ 0.24
EPHA3P29320 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.57■□□□□ 0.24
EPHA3P29320 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.57■□□□□ 0.24
EPHA3P29320 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.57■□□□□ 0.24
EPHA3P29320 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 AC083849.1-201ENST00000615227 514 ntBASIC16.57■□□□□ 0.24
EPHA3P29320 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
EPHA3P29320 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
EPHA3P29320 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 AC005052.1-201ENST00000625181 2492 ntBASIC16.57■□□□□ 0.24
EPHA3P29320 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
EPHA3P29320 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms