Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.62□□□□□ -0.07
CCL1P22362 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.62□□□□□ -0.07
CCL1P22362 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.62□□□□□ -0.07
CCL1P22362 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.62□□□□□ -0.07
CCL1P22362 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CCL1P22362 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CCL1P22362 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCL1P22362 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCL1P22362 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 ALOX12P2-203ENST00000570921 1945 ntBASIC14.61□□□□□ -0.07
CCL1P22362 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CCL1P22362 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 FOSL1P1-201ENST00000511041 816 ntBASIC14.61□□□□□ -0.07
CCL1P22362 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.61□□□□□ -0.07
CCL1P22362 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.61□□□□□ -0.07
CCL1P22362 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.61□□□□□ -0.07
CCL1P22362 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.61□□□□□ -0.07
CCL1P22362 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCL1P22362 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.61□□□□□ -0.07
CCL1P22362 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 SNX33P1-201ENST00000592116 1762 ntBASIC14.6□□□□□ -0.07
CCL1P22362 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
CCL1P22362 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.6□□□□□ -0.07
CCL1P22362 AC139887.3-201ENST00000568585 713 ntBASIC14.6□□□□□ -0.07
CCL1P22362 AL445228.2-201ENST00000605589 952 ntBASIC14.6□□□□□ -0.07
CCL1P22362 AL732292.2-201ENST00000609649 430 ntBASIC14.6□□□□□ -0.07
CCL1P22362 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 AL355877.3-201ENST00000622820 899 ntBASIC14.6□□□□□ -0.07
CCL1P22362 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCL1P22362 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.6□□□□□ -0.07
CCL1P22362 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms