Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
RAB4AP20338 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RAB4AP20338 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAB4AP20338 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.08□□□□□ -0.31
RAB4AP20338 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RAB4AP20338 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RAB4AP20338 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RAB4AP20338 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RAB4AP20338 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RAB4AP20338 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.08□□□□□ -0.32
RAB4AP20338 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 GUSBP6-202ENST00000438529 1198 ntBASIC13.08□□□□□ -0.32
RAB4AP20338 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RAB4AP20338 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RAB4AP20338 AL162430.1-201ENST00000480705 870 ntBASIC13.08□□□□□ -0.32
RAB4AP20338 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.08□□□□□ -0.32
RAB4AP20338 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.08□□□□□ -0.32
RAB4AP20338 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB4AP20338 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB4AP20338 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.08□□□□□ -0.32
RAB4AP20338 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB4AP20338 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.08□□□□□ -0.32
RAB4AP20338 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 TSPY6P-201ENST00000448518 926 ntBASIC13.07□□□□□ -0.32
RAB4AP20338 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.07□□□□□ -0.32
RAB4AP20338 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.07□□□□□ -0.32
RAB4AP20338 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.07□□□□□ -0.32
RAB4AP20338 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 ST20-AS1-201ENST00000560255 4223 ntBASIC13.07□□□□□ -0.32
RAB4AP20338 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.07□□□□□ -0.32
RAB4AP20338 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
RAB4AP20338 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 AC015656.1-201ENST00000624209 3578 ntBASIC13.07□□□□□ -0.32
RAB4AP20338 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 AC067750.1-201ENST00000608826 6545 ntBASIC13.07□□□□□ -0.32
RAB4AP20338 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RAB4AP20338 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.07□□□□□ -0.32
RAB4AP20338 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms