Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TNFRSF1BP20333 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 TMPOP1-202ENST00000424642 1267 ntBASIC15.83■□□□□ 0.12
TNFRSF1BP20333 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 CHCHD2P8-201ENST00000429873 447 ntBASIC15.83■□□□□ 0.12
TNFRSF1BP20333 BX276092.5-203ENST00000456199 560 ntBASIC15.83■□□□□ 0.12
TNFRSF1BP20333 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 AC005332.1-201ENST00000577698 1310 ntBASIC15.83■□□□□ 0.12
TNFRSF1BP20333 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 AC005052.1-201ENST00000625181 2492 ntBASIC15.83■□□□□ 0.12
TNFRSF1BP20333 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 HYMAI-201ENST00000635591 3347 ntBASIC15.83■□□□□ 0.12
TNFRSF1BP20333 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.83■□□□□ 0.12
TNFRSF1BP20333 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 PAUPAR-201ENST00000630360 2965 ntBASIC15.82■□□□□ 0.12
TNFRSF1BP20333 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.82■□□□□ 0.12
TNFRSF1BP20333 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 AL031133.1-201ENST00000406807 723 ntBASIC15.82■□□□□ 0.12
TNFRSF1BP20333 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 VENTXP7-201ENST00000475503 772 ntBASIC15.82■□□□□ 0.12
TNFRSF1BP20333 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TNFRSF1BP20333 CYP2T1P-202ENST00000641596 2535 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms