Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NFKB1P19838 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.3■□□□□ 0.36
NFKB1P19838 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.3■□□□□ 0.36
NFKB1P19838 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 AL645728.1-201ENST00000366221 2101 ntBASIC17.3■□□□□ 0.36
NFKB1P19838 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.3■□□□□ 0.36
NFKB1P19838 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.3■□□□□ 0.36
NFKB1P19838 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NFKB1P19838 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.3■□□□□ 0.36
NFKB1P19838 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 AL021920.2-201ENST00000624828 1351 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NFKB1P19838 AC092171.3-201ENST00000610122 2651 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
NFKB1P19838 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NFKB1P19838 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.29■□□□□ 0.36
NFKB1P19838 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.29■□□□□ 0.36
NFKB1P19838 HNRNPDP1-201ENST00000439535 754 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 PAWRP1-201ENST00000451083 565 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 AC018712.1-201ENST00000455767 687 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.29■□□□□ 0.36
NFKB1P19838 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 AC148477.8-201ENST00000624298 468 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 AL805961.1-202ENST00000641562 540 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 PCDHA14-201ENST00000506751 2298 ntBASIC17.29■□□□□ 0.36
NFKB1P19838 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NFKB1P19838 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.29■□□□□ 0.36
NFKB1P19838 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NFKB1P19838 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NFKB1P19838 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.28■□□□□ 0.36
NFKB1P19838 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NFKB1P19838 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 PI4KAP1-204ENST00000612579 1703 ntBASIC17.28■□□□□ 0.36
NFKB1P19838 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 AC004870.1-201ENST00000315132 882 ntBASIC17.28■□□□□ 0.36
NFKB1P19838 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 AC073621.1-201ENST00000392730 636 ntBASIC17.28■□□□□ 0.36
NFKB1P19838 KRT18P27-201ENST00000427733 1299 ntBASIC17.28■□□□□ 0.36
NFKB1P19838 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 KRT18P67-201ENST00000432816 1264 ntBASIC17.28■□□□□ 0.36
NFKB1P19838 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.28■□□□□ 0.36
NFKB1P19838 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
NFKB1P19838 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.28■□□□□ 0.36
NFKB1P19838 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
NFKB1P19838 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NFKB1P19838 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NFKB1P19838 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 KRT8P49-201ENST00000604166 1432 ntBASIC17.28■□□□□ 0.36
NFKB1P19838 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NFKB1P19838 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NFKB1P19838 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.28■□□□□ 0.36
NFKB1P19838 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms