Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC2P18074 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC2P18074 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.49■□□□□ 0.39
ERCC2P18074 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERCC2P18074 AC078925.2-201ENST00000624013 1973 ntBASIC17.49■□□□□ 0.39
ERCC2P18074 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERCC2P18074 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC2P18074 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
ERCC2P18074 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ERCC2P18074 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ERCC2P18074 AL645728.1-201ENST00000366221 2101 ntBASIC17.48■□□□□ 0.39
ERCC2P18074 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC2P18074 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ERCC2P18074 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
ERCC2P18074 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ERCC2P18074 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC2P18074 FDX1P1-201ENST00000449115 551 ntBASIC17.48■□□□□ 0.39
ERCC2P18074 AC108073.2-201ENST00000464002 357 ntBASIC17.48■□□□□ 0.39
ERCC2P18074 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC2P18074 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC2P18074 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.48■□□□□ 0.39
ERCC2P18074 REXO1L3P-201ENST00000622202 1288 ntBASIC17.48■□□□□ 0.39
ERCC2P18074 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC2P18074 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.48■□□□□ 0.39
ERCC2P18074 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC2P18074 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC2P18074 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC2P18074 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ERCC2P18074 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC2P18074 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ERCC2P18074 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC2P18074 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ERCC2P18074 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC2P18074 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ERCC2P18074 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC2P18074 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC2P18074 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC2P18074 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC2P18074 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC2P18074 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC2P18074 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.47■□□□□ 0.39
ERCC2P18074 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC2P18074 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 AC004790.2-201ENST00000623588 572 ntBASIC17.47■□□□□ 0.39
ERCC2P18074 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC2P18074 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ERCC2P18074 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 FLJ38576-201ENST00000623820 2459 ntBASIC17.47■□□□□ 0.39
ERCC2P18074 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.47■□□□□ 0.39
ERCC2P18074 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC2P18074 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
ERCC2P18074 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.47■□□□□ 0.39
ERCC2P18074 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC2P18074 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ERCC2P18074 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC2P18074 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC2P18074 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms