Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
UBCP0CG48 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
UBCP0CG48 CHCHD2P8-201ENST00000429873 447 ntBASIC14.97□□□□□ -0.01
UBCP0CG48 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBCP0CG48 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.97□□□□□ -0.01
UBCP0CG48 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBCP0CG48 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.97□□□□□ -0.01
UBCP0CG48 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.97□□□□□ -0.01
UBCP0CG48 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.97□□□□□ -0.01
UBCP0CG48 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
UBCP0CG48 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBCP0CG48 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.97□□□□□ -0.01
UBCP0CG48 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.97□□□□□ -0.01
UBCP0CG48 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBCP0CG48 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.97□□□□□ -0.01
UBCP0CG48 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
UBCP0CG48 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.97□□□□□ -0.01
UBCP0CG48 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBCP0CG48 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBCP0CG48 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.97□□□□□ -0.01
UBCP0CG48 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBCP0CG48 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 AC008741.2-201ENST00000612792 3115 ntBASIC14.96□□□□□ -0.01
UBCP0CG48 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 BX276092.5-203ENST00000456199 560 ntBASIC14.96□□□□□ -0.01
UBCP0CG48 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.96□□□□□ -0.01
UBCP0CG48 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.96□□□□□ -0.01
UBCP0CG48 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.96□□□□□ -0.01
UBCP0CG48 AL121672.3-201ENST00000608644 468 ntBASIC14.96□□□□□ -0.01
UBCP0CG48 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 AC073592.5-201ENST00000624854 528 ntBASIC14.96□□□□□ -0.01
UBCP0CG48 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.96□□□□□ -0.01
UBCP0CG48 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
UBCP0CG48 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.96□□□□□ -0.01
UBCP0CG48 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
UBCP0CG48 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
UBCP0CG48 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.96□□□□□ -0.02
UBCP0CG48 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
UBCP0CG48 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.95□□□□□ -0.02
UBCP0CG48 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBCP0CG48 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
UBCP0CG48 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.95□□□□□ -0.02
UBCP0CG48 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.95□□□□□ -0.02
UBCP0CG48 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBCP0CG48 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms