Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 AC009154.2-201ENST00000621177 724 ntBASIC15.34■□□□□ 0.05
HLA-DPB1P04440 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 IER3-202ENST00000376377 1350 ntBASIC15.34■□□□□ 0.05
HLA-DPB1P04440 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.34■□□□□ 0.05
HLA-DPB1P04440 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.33■□□□□ 0.05
HLA-DPB1P04440 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 AC112698.1-201ENST00000510299 916 ntBASIC15.33■□□□□ 0.04
HLA-DPB1P04440 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 AC116407.4-201ENST00000623319 1061 ntBASIC15.33■□□□□ 0.04
HLA-DPB1P04440 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.33■□□□□ 0.04
HLA-DPB1P04440 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HLA-DPB1P04440 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms