Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
IFNA1P01562 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.5□□□□□ -0.25
IFNA1P01562 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.5□□□□□ -0.25
IFNA1P01562 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
IFNA1P01562 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
IFNA1P01562 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 KRT17P3-201ENST00000420566 1262 ntBASIC13.5□□□□□ -0.25
IFNA1P01562 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 KRT18P65-201ENST00000439811 1286 ntBASIC13.5□□□□□ -0.25
IFNA1P01562 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.5□□□□□ -0.25
IFNA1P01562 AC010240.3-201ENST00000607688 395 ntBASIC13.5□□□□□ -0.25
IFNA1P01562 AC083880.1-201ENST00000608266 535 ntBASIC13.5□□□□□ -0.25
IFNA1P01562 CR392000.1-201ENST00000624770 1228 ntBASIC13.5□□□□□ -0.25
IFNA1P01562 AC073111.5-205ENST00000641717 521 ntBASIC13.5□□□□□ -0.25
IFNA1P01562 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
IFNA1P01562 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
IFNA1P01562 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.5□□□□□ -0.25
IFNA1P01562 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
IFNA1P01562 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 AC096733.2-201ENST00000609937 1394 ntBASIC13.49□□□□□ -0.25
IFNA1P01562 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
IFNA1P01562 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.49□□□□□ -0.25
IFNA1P01562 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.49□□□□□ -0.25
IFNA1P01562 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.49□□□□□ -0.25
IFNA1P01562 AC026185.1-201ENST00000445748 174 ntBASIC13.49□□□□□ -0.25
IFNA1P01562 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 B3GAT3P1-201ENST00000471720 806 ntBASIC13.49□□□□□ -0.25
IFNA1P01562 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.49□□□□□ -0.25
IFNA1P01562 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.49□□□□□ -0.25
IFNA1P01562 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.49□□□□□ -0.25
IFNA1P01562 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
IFNA1P01562 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
IFNA1P01562 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 AC006058.4-201ENST00000624016 1670 ntBASIC13.49□□□□□ -0.25
IFNA1P01562 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.49□□□□□ -0.25
IFNA1P01562 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
IFNA1P01562 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms