Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX6O95503 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX6O95503 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CBX6O95503 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CBX6O95503 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.02■□□□□ 0.31
CBX6O95503 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX6O95503 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CBX6O95503 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 DBET-201ENST00000630918 3363 ntBASIC17.01■□□□□ 0.31
CBX6O95503 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CBX6O95503 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CBX6O95503 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.01■□□□□ 0.31
CBX6O95503 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.01■□□□□ 0.31
CBX6O95503 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CBX6O95503 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CBX6O95503 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CBX6O95503 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 IFNL4P1-201ENST00000607083 540 ntBASIC17.01■□□□□ 0.31
CBX6O95503 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CBX6O95503 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.01■□□□□ 0.31
CBX6O95503 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CBX6O95503 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17■□□□□ 0.31
CBX6O95503 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17■□□□□ 0.31
CBX6O95503 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17■□□□□ 0.31
CBX6O95503 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17■□□□□ 0.31
CBX6O95503 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17■□□□□ 0.31
CBX6O95503 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17■□□□□ 0.31
CBX6O95503 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 EMBP1-201ENST00000458200 901 ntBASIC17■□□□□ 0.31
CBX6O95503 AC009078.2-202ENST00000463353 338 ntBASIC17■□□□□ 0.31
CBX6O95503 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17■□□□□ 0.31
CBX6O95503 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CBX6O95503 AC024243.1-201ENST00000609234 778 ntBASIC17■□□□□ 0.31
CBX6O95503 AC093525.9-201ENST00000624961 1746 ntBASIC17■□□□□ 0.31
CBX6O95503 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CBX6O95503 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CBX6O95503 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17■□□□□ 0.31
CBX6O95503 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17■□□□□ 0.31
CBX6O95503 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17■□□□□ 0.31
CBX6O95503 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17■□□□□ 0.31
CBX6O95503 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CBX6O95503 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX6O95503 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX6O95503 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
CBX6O95503 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX6O95503 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CBX6O95503 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.99■□□□□ 0.31
CBX6O95503 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX6O95503 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CBX6O95503 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms