Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLSTN1O94985 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLSTN1O94985 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLSTN1O94985 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.88■□□□□ 0.61
CLSTN1O94985 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC18.88■□□□□ 0.61
CLSTN1O94985 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
CLSTN1O94985 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.88■□□□□ 0.61
CLSTN1O94985 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
CLSTN1O94985 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CLSTN1O94985 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.88■□□□□ 0.61
CLSTN1O94985 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.88■□□□□ 0.61
CLSTN1O94985 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.88■□□□□ 0.61
CLSTN1O94985 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.88■□□□□ 0.61
CLSTN1O94985 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLSTN1O94985 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLSTN1O94985 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLSTN1O94985 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
CLSTN1O94985 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLSTN1O94985 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.87■□□□□ 0.61
CLSTN1O94985 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 AC011676.5-201ENST00000624864 2660 ntBASIC18.87■□□□□ 0.61
CLSTN1O94985 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.87■□□□□ 0.61
CLSTN1O94985 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.87■□□□□ 0.61
CLSTN1O94985 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLSTN1O94985 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.87■□□□□ 0.61
CLSTN1O94985 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.87■□□□□ 0.61
CLSTN1O94985 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.87■□□□□ 0.61
CLSTN1O94985 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.87■□□□□ 0.61
CLSTN1O94985 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.87■□□□□ 0.61
CLSTN1O94985 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.87■□□□□ 0.61
CLSTN1O94985 AC008608.2-201ENST00000606089 416 ntBASIC18.87■□□□□ 0.61
CLSTN1O94985 AC019129.2-201ENST00000609837 1235 ntBASIC18.87■□□□□ 0.61
CLSTN1O94985 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLSTN1O94985 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
CLSTN1O94985 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.87■□□□□ 0.61
CLSTN1O94985 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.87■□□□□ 0.61
CLSTN1O94985 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLSTN1O94985 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.87■□□□□ 0.61
CLSTN1O94985 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLSTN1O94985 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.86■□□□□ 0.61
CLSTN1O94985 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.86■□□□□ 0.61
CLSTN1O94985 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms