Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.26■□□□□ 0.35
USP1O94782 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.26■□□□□ 0.35
USP1O94782 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.26■□□□□ 0.35
USP1O94782 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.26■□□□□ 0.35
USP1O94782 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.26■□□□□ 0.35
USP1O94782 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
USP1O94782 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
USP1O94782 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.26■□□□□ 0.35
USP1O94782 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.26■□□□□ 0.35
USP1O94782 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.26■□□□□ 0.35
USP1O94782 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP1O94782 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
USP1O94782 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
USP1O94782 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.25■□□□□ 0.35
USP1O94782 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 AC099336.1-202ENST00000602961 463 ntBASIC17.25■□□□□ 0.35
USP1O94782 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.25■□□□□ 0.35
USP1O94782 AC073592.4-201ENST00000623827 446 ntBASIC17.25■□□□□ 0.35
USP1O94782 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP1O94782 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP1O94782 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
USP1O94782 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
USP1O94782 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
USP1O94782 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
USP1O94782 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 PCDHA1-201ENST00000378133 2726 ntBASIC17.24■□□□□ 0.35
USP1O94782 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP1O94782 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.24■□□□□ 0.35
USP1O94782 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.24■□□□□ 0.35
USP1O94782 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.24■□□□□ 0.35
USP1O94782 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
USP1O94782 MIR5100-201ENST00000579544 119 ntBASIC17.24■□□□□ 0.35
USP1O94782 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.24■□□□□ 0.35
USP1O94782 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
USP1O94782 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
USP1O94782 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
USP1O94782 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP1O94782 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms