Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC4O75487 AL020989.1-201ENST00000422979 469 ntBASIC17.09■□□□□ 0.33
GPC4O75487 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.09■□□□□ 0.33
GPC4O75487 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC4O75487 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GPC4O75487 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.09■□□□□ 0.33
GPC4O75487 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.09■□□□□ 0.33
GPC4O75487 AL355877.3-201ENST00000622820 899 ntBASIC17.09■□□□□ 0.33
GPC4O75487 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
GPC4O75487 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC4O75487 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GPC4O75487 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.09■□□□□ 0.33
GPC4O75487 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GPC4O75487 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GPC4O75487 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
GPC4O75487 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.08■□□□□ 0.33
GPC4O75487 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GPC4O75487 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
GPC4O75487 AC148477.5-201ENST00000625164 1645 ntBASIC17.08■□□□□ 0.32
GPC4O75487 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC4O75487 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
GPC4O75487 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC4O75487 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.08■□□□□ 0.32
GPC4O75487 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 LINC01711-201ENST00000598340 967 ntBASIC17.08■□□□□ 0.32
GPC4O75487 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC4O75487 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC4O75487 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC4O75487 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.08■□□□□ 0.32
GPC4O75487 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
GPC4O75487 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GPC4O75487 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GPC4O75487 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC4O75487 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GPC4O75487 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
GPC4O75487 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC4O75487 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC4O75487 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
GPC4O75487 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
GPC4O75487 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.07■□□□□ 0.32
GPC4O75487 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.07■□□□□ 0.32
GPC4O75487 SAPCD2P3-201ENST00000455031 850 ntBASIC17.07■□□□□ 0.32
GPC4O75487 AF238378.1-201ENST00000526806 358 ntBASIC17.07■□□□□ 0.32
GPC4O75487 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.07■□□□□ 0.32
GPC4O75487 MTDHP3-201ENST00000594186 672 ntBASIC17.07■□□□□ 0.32
GPC4O75487 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GPC4O75487 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC4O75487 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.07■□□□□ 0.32
GPC4O75487 UBALD1-205ENST00000590891 2641 ntBASIC17.07■□□□□ 0.32
GPC4O75487 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GPC4O75487 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms