Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.44■□□□□ 0.22
SEC22BO75396 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.44■□□□□ 0.22
SEC22BO75396 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.44■□□□□ 0.22
SEC22BO75396 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.44■□□□□ 0.22
SEC22BO75396 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC22BO75396 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.44■□□□□ 0.22
SEC22BO75396 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.43■□□□□ 0.22
SEC22BO75396 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.43■□□□□ 0.22
SEC22BO75396 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.43■□□□□ 0.22
SEC22BO75396 ACTG1P4-201ENST00000425123 1122 ntBASIC16.43■□□□□ 0.22
SEC22BO75396 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 AC012615.1-201ENST00000565797 1299 ntBASIC16.43■□□□□ 0.22
SEC22BO75396 MIR3180-1-201ENST00000580374 94 ntBASIC16.43■□□□□ 0.22
SEC22BO75396 MIR3180-3-201ENST00000584616 94 ntBASIC16.43■□□□□ 0.22
SEC22BO75396 AC092329.2-201ENST00000598402 547 ntBASIC16.43■□□□□ 0.22
SEC22BO75396 AC097637.2-201ENST00000624096 1997 ntBASIC16.43■□□□□ 0.22
SEC22BO75396 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SEC22BO75396 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.43■□□□□ 0.22
SEC22BO75396 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC22BO75396 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SEC22BO75396 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC22BO75396 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC22BO75396 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC22BO75396 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SEC22BO75396 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
SEC22BO75396 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SEC22BO75396 SPDYE21P-201ENST00000413323 827 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.42■□□□□ 0.22
SEC22BO75396 NUS1P1-201ENST00000446295 882 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.42■□□□□ 0.22
SEC22BO75396 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 AC099336.1-202ENST00000602961 463 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 AC069148.1-201ENST00000608741 768 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 AL358472.4-201ENST00000633140 710 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC22BO75396 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC22BO75396 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC22BO75396 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.42■□□□□ 0.22
SEC22BO75396 TUBB8P12-201ENST00000308911 1335 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 TUBB7P-202ENST00000428444 1305 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 TUBB8P7-204ENST00000567960 1332 ntBASIC16.42■□□□□ 0.22
SEC22BO75396 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC22BO75396 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC22BO75396 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms