Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
XRCC2O43543 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
XRCC2O43543 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
XRCC2O43543 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.81□□□□□ -0.04
XRCC2O43543 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.81□□□□□ -0.04
XRCC2O43543 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.81□□□□□ -0.04
XRCC2O43543 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.81□□□□□ -0.04
XRCC2O43543 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.81□□□□□ -0.04
XRCC2O43543 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.81□□□□□ -0.04
XRCC2O43543 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.81□□□□□ -0.04
XRCC2O43543 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 NKAPP1-205ENST00000585790 367 ntBASIC14.81□□□□□ -0.04
XRCC2O43543 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.81□□□□□ -0.04
XRCC2O43543 AC008608.2-201ENST00000606089 416 ntBASIC14.81□□□□□ -0.04
XRCC2O43543 AC092068.3-201ENST00000587894 2016 ntBASIC14.81□□□□□ -0.04
XRCC2O43543 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
XRCC2O43543 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.81□□□□□ -0.04
XRCC2O43543 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
XRCC2O43543 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
XRCC2O43543 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
XRCC2O43543 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.8□□□□□ -0.04
XRCC2O43543 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.8□□□□□ -0.04
XRCC2O43543 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
XRCC2O43543 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.8□□□□□ -0.04
XRCC2O43543 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.8□□□□□ -0.04
XRCC2O43543 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.8□□□□□ -0.04
XRCC2O43543 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
XRCC2O43543 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.8□□□□□ -0.04
XRCC2O43543 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.8□□□□□ -0.04
XRCC2O43543 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.8□□□□□ -0.04
XRCC2O43543 AL353135.1-201ENST00000606729 504 ntBASIC14.8□□□□□ -0.04
XRCC2O43543 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 AL589182.2-201ENST00000619332 1049 ntBASIC14.8□□□□□ -0.04
XRCC2O43543 REXO1L6P-202ENST00000619970 1078 ntBASIC14.8□□□□□ -0.04
XRCC2O43543 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
XRCC2O43543 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
XRCC2O43543 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
XRCC2O43543 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
XRCC2O43543 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
XRCC2O43543 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms