Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SEMA3EO15041 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.36■□□□□ 0.85
SEMA3EO15041 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SEMA3EO15041 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SEMA3EO15041 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 LINC00895-201ENST00000629028 1637 ntBASIC20.35■□□□□ 0.85
SEMA3EO15041 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.35■□□□□ 0.85
SEMA3EO15041 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.35■□□□□ 0.85
SEMA3EO15041 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SEMA3EO15041 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.35■□□□□ 0.85
SEMA3EO15041 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
SEMA3EO15041 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
SEMA3EO15041 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SEMA3EO15041 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.35■□□□□ 0.85
SEMA3EO15041 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.35■□□□□ 0.85
SEMA3EO15041 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SEMA3EO15041 AC244517.3-201ENST00000616254 1235 ntBASIC20.35■□□□□ 0.85
SEMA3EO15041 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 PP12613-201ENST00000424958 2230 ntBASIC20.35■□□□□ 0.85
SEMA3EO15041 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 AC092053.1-201ENST00000605787 1936 ntBASIC20.35■□□□□ 0.85
SEMA3EO15041 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.35■□□□□ 0.85
SEMA3EO15041 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SEMA3EO15041 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.34■□□□□ 0.85
SEMA3EO15041 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.34■□□□□ 0.85
SEMA3EO15041 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.34■□□□□ 0.85
SEMA3EO15041 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
SEMA3EO15041 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SEMA3EO15041 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.34■□□□□ 0.85
SEMA3EO15041 KRT18P32-201ENST00000424695 1287 ntBASIC20.34■□□□□ 0.85
SEMA3EO15041 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.34■□□□□ 0.85
SEMA3EO15041 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SEMA3EO15041 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.34■□□□□ 0.85
SEMA3EO15041 AL512356.2-201ENST00000546955 174 ntBASIC20.34■□□□□ 0.85
SEMA3EO15041 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.34■□□□□ 0.85
SEMA3EO15041 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC20.34■□□□□ 0.85
SEMA3EO15041 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.34■□□□□ 0.85
SEMA3EO15041 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.34■□□□□ 0.85
SEMA3EO15041 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.34■□□□□ 0.85
SEMA3EO15041 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.34■□□□□ 0.85
SEMA3EO15041 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.34■□□□□ 0.85
SEMA3EO15041 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SEMA3EO15041 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.34■□□□□ 0.85
SEMA3EO15041 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.34■□□□□ 0.85
SEMA3EO15041 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.34■□□□□ 0.85
SEMA3EO15041 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.34■□□□□ 0.85
SEMA3EO15041 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SEMA3EO15041 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SEMA3EO15041 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.33■□□□□ 0.85
SEMA3EO15041 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.33■□□□□ 0.85
SEMA3EO15041 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SEMA3EO15041 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
SEMA3EO15041 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA3EO15041 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA3EO15041 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.33■□□□□ 0.85
SEMA3EO15041 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.33■□□□□ 0.85
SEMA3EO15041 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA3EO15041 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.33■□□□□ 0.85
SEMA3EO15041 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.33■□□□□ 0.85
SEMA3EO15041 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SEMA3EO15041 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA3EO15041 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SEMA3EO15041 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.33■□□□□ 0.85
SEMA3EO15041 AC008267.7-201ENST00000624570 1194 ntBASIC20.33■□□□□ 0.85
SEMA3EO15041 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.33■□□□□ 0.85
SEMA3EO15041 AL023806.1-201ENST00000603994 1649 ntBASIC20.33■□□□□ 0.84
SEMA3EO15041 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.33■□□□□ 0.84
SEMA3EO15041 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SEMA3EO15041 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.33■□□□□ 0.84
SEMA3EO15041 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SEMA3EO15041 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SEMA3EO15041 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SEMA3EO15041 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms