Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CASQ2O14958 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
CASQ2O14958 AC006058.4-201ENST00000624016 1670 ntBASIC16.21■□□□□ 0.18
CASQ2O14958 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.21■□□□□ 0.18
CASQ2O14958 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CASQ2O14958 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.2■□□□□ 0.18
CASQ2O14958 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.2■□□□□ 0.18
CASQ2O14958 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 FAM45BP-202ENST00000592932 1624 ntBASIC16.2■□□□□ 0.18
CASQ2O14958 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.2■□□□□ 0.18
CASQ2O14958 AC233263.1-201ENST00000578059 224 ntBASIC16.2■□□□□ 0.18
CASQ2O14958 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CASQ2O14958 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.2■□□□□ 0.18
CASQ2O14958 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASQ2O14958 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CASQ2O14958 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.19■□□□□ 0.18
CASQ2O14958 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CASQ2O14958 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
CASQ2O14958 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.19■□□□□ 0.18
CASQ2O14958 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 AL353807.1-201ENST00000427475 662 ntBASIC16.19■□□□□ 0.18
CASQ2O14958 AC002558.1-201ENST00000488906 803 ntBASIC16.19■□□□□ 0.18
CASQ2O14958 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.19■□□□□ 0.18
CASQ2O14958 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 AC124016.1-201ENST00000609552 612 ntBASIC16.19■□□□□ 0.18
CASQ2O14958 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CASQ2O14958 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 AC138969.2-201ENST00000532739 9932 ntBASIC16.19■□□□□ 0.18
CASQ2O14958 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CASQ2O14958 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.19■□□□□ 0.18
CASQ2O14958 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CASQ2O14958 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASQ2O14958 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CASQ2O14958 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASQ2O14958 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASQ2O14958 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASQ2O14958 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASQ2O14958 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASQ2O14958 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASQ2O14958 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.18■□□□□ 0.18
CASQ2O14958 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.18■□□□□ 0.18
CASQ2O14958 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.18■□□□□ 0.18
CASQ2O14958 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASQ2O14958 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms