Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDN4O14493 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
CLDN4O14493 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
CLDN4O14493 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDN4O14493 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CLDN4O14493 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN4O14493 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 TUBB8P12-201ENST00000308911 1335 ntBASIC16.02■□□□□ 0.16
CLDN4O14493 TUBB7P-202ENST00000428444 1305 ntBASIC16.02■□□□□ 0.16
CLDN4O14493 TUBB8P7-204ENST00000567960 1332 ntBASIC16.02■□□□□ 0.16
CLDN4O14493 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLDN4O14493 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CLDN4O14493 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 AL022342.1-201ENST00000400363 863 ntBASIC16.02■□□□□ 0.16
CLDN4O14493 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN4O14493 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.02■□□□□ 0.16
CLDN4O14493 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN4O14493 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN4O14493 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN4O14493 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN4O14493 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN4O14493 AC106730.1-201ENST00000566722 1090 ntBASIC16.02■□□□□ 0.16
CLDN4O14493 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN4O14493 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN4O14493 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN4O14493 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN4O14493 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.02■□□□□ 0.15
CLDN4O14493 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLDN4O14493 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.02■□□□□ 0.15
CLDN4O14493 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN4O14493 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN4O14493 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN4O14493 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN4O14493 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN4O14493 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN4O14493 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN4O14493 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN4O14493 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
CLDN4O14493 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 VN2R19P-201ENST00000442399 1052 ntBASIC16.01■□□□□ 0.15
CLDN4O14493 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN4O14493 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN4O14493 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.01■□□□□ 0.15
CLDN4O14493 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLDN4O14493 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CLDN4O14493 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN4O14493 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN4O14493 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN4O14493 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN4O14493 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN4O14493 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN4O14493 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms