Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DUX4L7-201ENST00000630678 1275 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 DUX4L5-201ENST00000630834 1275 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AC005089.1-201ENST00000619486 2241 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 AC010336.1-201ENST00000539278 4739 ntBASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
CHKB-CPT1BH3BT56 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 NXPE3-205ENST00000491511 8074 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 AL671710.1-201ENST00000610245 2349 ntBASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 AC023908.3-201ENST00000564211 3047 ntBASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 GUK1-208ENST00000366728 842 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 VMO1-204ENST00000441199 741 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 YBX1P1-201ENST00000445822 960 ntBASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 PRTG-204ENST00000561292 833 ntTSL 3 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
CHKB-CPT1BH3BT56 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC9.41□□□□□ -0.9
CHKB-CPT1BH3BT56 AC118758.2-201ENST00000614242 2813 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms