Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV5A0A0B4J249 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 AC087499.1-201ENST00000418141 1075 ntBASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 STK25P1-201ENST00000585406 838 ntBASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV5A0A0B4J249 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 GPR89P-201ENST00000407924 1495 ntBASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 AC125634.1-201ENST00000438758 1403 ntBASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 AC112907.2-201ENST00000448639 330 ntBASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 AL596257.1-201ENST00000641463 2694 ntBASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV5A0A0B4J249 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms