Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 AC004233.3-201ENST00000607794 1269 ntBASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 AC003101.2-201ENST00000612557 442 ntBASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HCFC2Q9Y5Z7 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.64■□□□□ 0.42
HCFC2Q9Y5Z7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HCFC2Q9Y5Z7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 AL008721.1-201ENST00000609964 604 ntBASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 AL138828.2-201ENST00000615812 383 ntBASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 AP3S2-216ENST00000617003 1561 ntBASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HCFC2Q9Y5Z7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 SPTLC1P1-201ENST00000447199 261 ntBASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 AC007967.4-201ENST00000614700 386 ntBASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HCFC2Q9Y5Z7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HCFC2Q9Y5Z7 AC073389.1-201ENST00000595595 795 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms