Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 AD000864.1-201ENST00000624076 2295 ntBASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 AC108751.1-201ENST00000490852 363 ntBASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 AC005593.1-201ENST00000624894 515 ntBASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 NCF1C-201ENST00000438382 1427 ntBASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDHB1Q9Y5F3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 AC092053.1-201ENST00000605787 1936 ntBASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 KRT18P27-201ENST00000427733 1299 ntBASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDHB1Q9Y5F3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
PCDHB1Q9Y5F3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 METTL21AP1-201ENST00000438852 635 ntBASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 KRT18P2-201ENST00000447938 1258 ntBASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHB1Q9Y5F3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms