Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 AC243591.1-201ENST00000452967 1364 ntBASIC17.11■□□□□ 0.33
PKP3Q9Y446 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.11■□□□□ 0.33
PKP3Q9Y446 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PKP3Q9Y446 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 PI4KAP1-204ENST00000612579 1703 ntBASIC17.1■□□□□ 0.33
PKP3Q9Y446 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 AP001005.1-201ENST00000571755 1248 ntBASIC17.1■□□□□ 0.33
PKP3Q9Y446 AL356488.2-201ENST00000602755 427 ntBASIC17.1■□□□□ 0.33
PKP3Q9Y446 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 AC005593.1-201ENST00000624894 515 ntBASIC17.1■□□□□ 0.33
PKP3Q9Y446 AF228730.7-201ENST00000641842 219 ntBASIC17.1■□□□□ 0.33
PKP3Q9Y446 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PKP3Q9Y446 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
PKP3Q9Y446 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 AC080080.1-201ENST00000625121 2420 ntBASIC17.09■□□□□ 0.33
PKP3Q9Y446 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 AC073621.1-201ENST00000392730 636 ntBASIC17.09■□□□□ 0.33
PKP3Q9Y446 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 MRPL3P1-201ENST00000400109 1033 ntBASIC17.09■□□□□ 0.33
PKP3Q9Y446 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 RPS15P9-201ENST00000494093 319 ntBASIC17.09■□□□□ 0.33
PKP3Q9Y446 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 TERC-201ENST00000602385 541 ntBASIC17.09■□□□□ 0.33
PKP3Q9Y446 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 AL121761.2-201ENST00000598007 1648 ntBASIC17.09■□□□□ 0.33
PKP3Q9Y446 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PKP3Q9Y446 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PKP3Q9Y446 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PKP3Q9Y446 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PKP3Q9Y446 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.08■□□□□ 0.33
PKP3Q9Y446 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PKP3Q9Y446 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
PKP3Q9Y446 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PKP3Q9Y446 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.08■□□□□ 0.33
PKP3Q9Y446 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PKP3Q9Y446 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PKP3Q9Y446 AC092068.3-201ENST00000587894 2016 ntBASIC17.08■□□□□ 0.33
PKP3Q9Y446 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PKP3Q9Y446 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms