Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 RNF126P1-202ENST00000569893 925 ntBASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 IGHV3-41-201ENST00000613121 348 ntBASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.57■□□□□ 0.72
R3HCC1Q9Y3T6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AL513523.2-202ENST00000427283 2040 ntBASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 TSPY12P-201ENST00000421279 868 ntBASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AC090616.6-201ENST00000582640 721 ntBASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
R3HCC1Q9Y3T6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 AL390719.2-201ENST00000606993 987 ntBASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 AC004263.2-201ENST00000617183 678 ntBASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.55■□□□□ 0.72
R3HCC1Q9Y3T6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
R3HCC1Q9Y3T6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
R3HCC1Q9Y3T6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
R3HCC1Q9Y3T6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms