Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 MIR661-201ENST00000384842 89 ntBASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 TSPY16P-201ENST00000449843 468 ntBASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 RN7SL204P-201ENST00000582831 262 ntBASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 AL390754.1-201ENST00000619088 582 ntBASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
GTF2IRD1Q9UHL9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 TERF1P3-201ENST00000505638 1227 ntBASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 IGHV3-42-201ENST00000520410 361 ntBASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 AC069120.2-201ENST00000524091 540 ntBASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GTF2IRD1Q9UHL9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.58■□□□□ 0.57
GTF2IRD1Q9UHL9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 AC097493.3-201ENST00000509725 367 ntBASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GTF2IRD1Q9UHL9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GTF2IRD1Q9UHL9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms