Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 HLA-L-209ENST00000420110 1011 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 AC012618.2-201ENST00000428058 849 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 AC026471.5-201ENST00000615068 467 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 AC113410.3-201ENST00000623366 203 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 AC099063.4-201ENST00000641099 1602 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 MTHFR-217ENST00000641820 1569 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 HLA-A-202ENST00000376806 1854 ntBASIC16.54■□□□□ 0.24
NDE1Q9NXR1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
NDE1Q9NXR1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 AC107956.1-201ENST00000494359 873 ntBASIC16.53■□□□□ 0.24
NDE1Q9NXR1 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.53■□□□□ 0.24
NDE1Q9NXR1 LINC02228-204ENST00000642115 2962 ntBASIC16.53■□□□□ 0.24
NDE1Q9NXR1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 FLJ16779-201ENST00000612722 7638 ntBASIC16.53■□□□□ 0.24
NDE1Q9NXR1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDE1Q9NXR1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 COX5BP2-201ENST00000392354 334 ntBASIC16.52■□□□□ 0.24
NDE1Q9NXR1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.52■□□□□ 0.24
NDE1Q9NXR1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.52■□□□□ 0.23
NDE1Q9NXR1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms