Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AL020989.1-201ENST00000422979 469 ntBASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AP005901.3-202ENST00000581653 237 ntBASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THUMPD1Q9NXG2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AC091607.1-201ENST00000490318 1060 ntBASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 TPSP2-201ENST00000561760 610 ntBASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AC114341.1-201ENST00000618070 349 ntBASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AL590326.2-201ENST00000625139 305 ntBASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 AC026691.1-201ENST00000602502 2017 ntBASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
THUMPD1Q9NXG2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 PCED1CP-201ENST00000419887 785 ntBASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 AC096582.2-201ENST00000510860 516 ntBASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
THUMPD1Q9NXG2 NSUN5P1-202ENST00000421140 1535 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms